Missouri State University - Mountain Grove

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Grapevine Biotechnology 

Table 3. Preliminary functional annotation of 121 Norton ESTs from young leaf tissue

Text in purple italics indicates ESTs that align with V. vinifera orthologues.
Functional Category Functional Annotation

 

chalcone synthase [Vitis vinifera] 4

flavanone 3-hydroxylase [Vitis vinifera] 1

S-adenosyl-L-methionine synthetase [Elaeagnus umbellata] 1

S-adenosyl-L-methionine synthetase [Dendrobium crumenatum] 1

S-adenosyl-L-methionine synthetase 2 [Catharanthus roseus] 1

pathogenesis-related protein 5-1 [Helianthus annuus] 1

basic chitinase [Arabidopsis thaliana] 1

proline-rich protein [Glycine max] 4

RPT2 [Arabidopsis thaliana] 1

WRKY transcription factor 30 [Arabidopsis thaliana] 1

Avr9/Cf-9 rapidly elicited protein 65 [Nicotiana tabacum] 1

heat shock protein 70 [Saussurea medusa] 1

heat shock protein 70 [Saussurea medusa] 1

dehydration-responsive protein RD22 [Prunus persica] 1

dehydration stress-induced protein [Arabidopsis thaliana] 1

ripening-related protein-like [Arabidopsis thaliana] 1

Late embryogenesis abundant protein Lea14-A 1

DnaJ homolog [Salix gilgiana] 1

S-adenosyl-L-methionine Mg-protoporphyrin IX methyltranserase 1

putative transcription factor [Vitis vinifera] 1

putative RNA polymerase B transcription factor 3 [Arabidopsis 1

zinc-finger protein 1 [Datisca glomerata] 2

putative AP2 domain containing protein [Arabidopsis thaliana] 1

nucleic acid binding protein-like [Arabidopsis thaliana] 1

EREBP-3 homolog [Stylosanthes hamata] 1

CONSTANS B-box zinc finger family protein; protein id: At5g54470.1 1

zinc finger transcription factor-like protein [Arabidopsis) 1

zinc-finger protein 1 [Datisca glomerata] 1

CCR4-associated factor 1-like protein; protein id: At3g44260.1 1

osmotic stress-induced zinc-finger protein [Nicotiana tabacum] 1

chlorophyll a/b binding protein precursor - upland cotton 5

small subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase 3

chlorophyll a/b-binding protein [Mesembryanthemum crystallinum] 1

chlorophyll a-b binding protein of lhcii type i (cab) (LHCP) 1

Chlorophyll A-B binding protein 4, chloroplast precursor (LHCII) 1

light harvesting chlorophyll A/B binding protein [Prunus persica] 2

early light-induced protein-like protein [Retama raetam] 1

chloroplast protein 12 [Nicotiana tabacum] 1

chlorophyll a/b-binding protein type I precursor - tomato 1

chlorophyll a/b-binding protein (clone pINEab 43) - Scotch pine 1

cytochrome P450 monooxygenase 98A2p - soybean 1

photosystem I subunit X precursor; protein id: At1g30380.1, 1

Ribulose bisphosphate carboxylase small chain, chloroplast 1

subunit XI of photosystem I reaction center [Spinacia oleracea] 1

photosystem II protein psbT - upland cotton 1

Beta-tubulin [Zinnia elegans] 1

putative kinesin light chain [Arabidopsis thaliana] 1

Similar to Histone 3.2-614 [Homo sapiens] 1

histone H2B [Cicer arietinum] 1

histone H1 [Lathyrus sativus] 1

histone H1 [Euphorbia esula] 1

histone H4 (TH091) - wheat 1

histone H4 [Allium cepa] 1

histone H2A [Cicer arietinum] 1

phosphohydrolase [Methanosarcina mazei Goe1] 1

glyceraldehyde-3-phosphate dehydrogenase (NADP) (phosphorylating) 1

H+-transporting two-sector ATPase (EC 3.6.3.14) delta chain 1

putative aldolase [Arabidopsis thaliana] 1

contains similarity to ferredoxin-thioredoxin reductase variable 1

putative thioredoxin [Oryza sativa (japonica cultivar-group)] 1

glyceraldehyde-3-phosphate dehydrogenase (NADP) (phosphorylating) 2

polyubiquitin - tomato 1

polyubiquitin [Elaeagnus umbellata] 1

calcium binding protein [Sesbania rostrata] 1

14-3-3 protein [Vigna angularis] 1

nodulin-like protein; protein id: At1g75500.1, supported by cDNA: 1

auxin-binding protein ABP20 precursor 1

auxin-binding protein [Prunus persica] 1

calcium-binding protein [Olea europaea] 1

probable protein kinase [imported] - Arabidopsis thaliana 1

putative pollen surface protein [Arabidopsis thaliana] 1

expansin-like protein [Oryza sativa (japonica cultivar-group)] 1

extensin-like protein - cowpea (fragment) 1

glycine-rich protein 2 [Fagus sylvatica] 1

40S ribosomal protein S2 homolog [Arabidopsis thaliana] 1

ribosomal protein L12-1a [Nicotiana tabacum] 1

lipid transfer protein 3 precursor [Gossypium hirsutum] 1

putative mitochondrial dicarboxylate carrier protein [Arabidopsis 1

vacuolar H+-transporting ATPase 16K chain; protein id: At4g34720.1, 1

RNA and export factor binding protein 2-I-like protein [Arabidopsis] 1

pre-plastocyanin (AA -64 to 106) [Lycopersicon esculentum] 2

phi-1 [Nicotiana tabacum] 1

fiddlehead-like protein [Gossypium hirsutum] 1

BURP domain-containing protein [Bruguiera gymnorrhiza] 1

HVR-1 [Hepatitis C virus] 1

cytoplasmic aconitate hydratase [Arabidopsis thaliana] 1

oxygen evolving enhancer protein 1 precursor [Bruguiera] 1

nam-like protein 10 [Petunia x hybrida] 1

cyclophilin [Ricinus communis] 1

amelogenin [Xenopus laevis] 1

ebiP1657 [Anopheles gambiae str. PEST] 1

plastocyanin b precursor [Populus nigra] 1

HMG-1 like protein gene [Glycine max] 1

hypothetical protein [Erwinia amylovora] 1

hypothetical protein [Erwinia amylovora] 1

P0414E03.8 [Oryza sativa (japonica cultivar-group)] 1

OSJNBb0093M23.11 [Oryza sativa (japonica cultivar-group)] 1

AT4g05320/C17L7_240 [Arabidopsis thaliana] 1

P0463A02.19 [Oryza sativa (japonica cultivar-group)] 1

protein T1F9.16 [imported] - Arabidopsis thaliana 1

AT3g47850/T23J7_180 [Arabidopsis thaliana] 1

expressed protein; protein id: At1g56090.1, supported by cDNA: 1

unknown [Arabidopsis thaliana] 1

unknown protein; protein id: At1g72510.1 [Arabidopsis thaliana] 1

putative protein; protein id: At3g60480.1, supported by cDNA: 5609. 1

unknown protein; protein id: At1g72510.1 [Arabidopsis thaliana] 1

putative protein; protein id: At5g24660.1, supported by cDNA: 1

Unknown protein [Oryza sativa] 1

hypothetical protein F6G17.100 - Arabidopsis thaliana 1

hypothetical protein; protein id: At3g24440.1 [Arabidopsis 1

unknown [Arabidopsis thaliana] 1

AT5g02160 [Arabidopsis thaliana] 1

hypothetical protein [Plasmodium falciparum 3D7] 1

hypothetical protein F10M10.180 - Arabidopsis thaliana 1

putative protein; protein id: At3g62770.1, supported by cDNA: 1

unknown protein [Arabidopsis thaliana] 1

hypothetical protein; protein id: At1g32690.1 [Arabidopsis 1

hypothetical protein 2 - soybean (fragment) 1

hypothetical protein At2g17230 [imported] - Arabidopsis thaliana 1

T23E23.15 [Arabidopsis thaliana] 1

emb|CAB86085.1~gene_id:MUF9.21~similar to unknown protein 1

hypothetical protein T23J7.180 - Arabidopsis thaliana 1